Additional information¶
- Version:
0.6.5
- Date:
Nov 20, 2023
Project Status¶
The project is available on GitHub. You can report issues or contribute to the project by forking the project and creating pull requests. See additional details on BacterialTyper developer guidelines and how to work with Git.
Background¶
Staphylococcus aureus is a major bacterial pathogen causing a variety of diseases ranging from wound infections to severe bacteremia or intoxications. Besides host factors, the course and severity of disease is also widely dependent on the genotype of the bacterium [12]. Whole-genome sequencing (WGS) and the following bioinformatic sequence analysis, is the most extensive genotyping method available but neither open, easy, direct and straighforward analysis are available that provide researchers with integrative genotyping information.
The BacterialTyper pipeline started as a collaboration with Dra. Cristina Prat and Dra. Alicia Lacoma to asses the
genotyping characteristics of a set of S. aureus samples.
License¶
This is brief description of the license terms for BacterialTyper.
Credits¶
Give credit to who deserves
Citation¶
Please cite the BacterialTyper project, code or documentation using the following links:
Github statistics¶
These are Github statistics generated for each release of the code.
GitHub stats for 20xx/xx/xx - 20xx/xx/xx (tag: vX.X.X)
What’s new?¶
See below information on differences among each release of the code generated.