.. _modules:

Modules
=======

.. only:: html

    :Version: |version|
    :Date: |today|

Developer guidelines for ``BacterialTyper`` modules.

.. toctree::
   :maxdepth: 1

   annot.rst
   assemble.rst
   citation.rst
   config.rst
   cluster.rst
   database.rst
   ident.rst
   help_info.rst
   qc.rst
   profile.rst
   phylo.rst
   MGE.rst
   metadata.rst
   report_generation.rst
   run.rst
   prep.rst
   test.rst
   trimm.rst
   version.rst